{"id":23177,"date":"2025-03-03T13:00:37","date_gmt":"2025-03-03T18:00:37","guid":{"rendered":"https:\/\/enterprise-knowledge.com\/?p=23177"},"modified":"2025-11-17T17:16:03","modified_gmt":"2025-11-17T22:16:03","slug":"extracting-knowledge-from-documents-enabling-semantic-search","status":"publish","type":"post","link":"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/","title":{"rendered":"Extracting Knowledge from Documents: Enabling Semantic Search for Pharmaceutical Research and Development"},"content":{"rendered":"\r\n<div class=\"wp-block-media-text alignwide is-stacked-on-mobile is-vertically-aligned-top\" style=\"grid-template-columns: 15% auto;\">\r\n<figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"771\" height=\"771\" class=\"wp-image-11017 size-full\" src=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01.png\" alt=\"\" srcset=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01.png 771w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01-336x336.png 336w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01-140x140.png 140w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01-768x768.png 768w\" sizes=\"auto, (max-width: 771px) 100vw, 771px\" \/><\/figure>\r\n<div class=\"wp-block-media-text__content\">\r\n<h2 class=\"wp-block-heading\">The Challenge<\/h2>\r\n\r\n\r\n<span style=\"font-weight: 400;\">A major pharmaceutical research and development company faced difficulty creating regulatory reports and files based on years of drug experimentation data. Their regulatory intelligence teams and drug development chemists spent dozens of hours searching through hundreds of thousands of documents to <\/span><span style=\"font-weight: 400;\">find past experiments and their results in order <\/span><span style=\"font-weight: 400;\">to fill out regulatory compliance documentation. The company\u2019s internal search platform enabled users to look for documents, but required exact matches on specific keywords to surface relevant results, and lacked useful search filters. Additionally, due to the nature of chemistry and drug development, many documents were difficult to understand at a glance and required scientists to read through them in order to determine if they were relevant or not.<\/span> <\/div>\r\n<\/div>\r\n\r\n\r\n\r\n<div class=\"wp-block-media-text alignwide is-stacked-on-mobile is-vertically-aligned-top\" style=\"grid-template-columns: 15% auto;\">\r\n<figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"771\" height=\"771\" class=\"wp-image-11018 size-full\" src=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Solution-01.png\" alt=\"\" srcset=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Solution-01.png 771w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Solution-01-336x336.png 336w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Solution-01-140x140.png 140w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Solution-01-768x768.png 768w\" sizes=\"auto, (max-width: 771px) 100vw, 771px\" \/><\/figure>\r\n<div class=\"wp-block-media-text__content\">\r\n<h2 class=\"wp-block-heading\">The Solution<\/h2>\r\n\r\n\r\n<span style=\"font-weight: 400;\">EK collaborated with the company to improve their internal search platform by enhancing Electronic Lab Notebook (ELN) metadata, thereby increasing the searchability and findability of critical research documents, and created a strategy for leveraging ELNs in AI-powered services such as chatbots and LLM-generated document summaries. EK worked with the business stakeholders to evaluate the most important information within ELNs and understand the document structure, and developed semantic models in their taxonomy management system with more than 960 relevant concepts designed to capture the way their expert chemists understand the experimental activities and molecules referenced in the ELNs. <a href=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360.png\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-23196 size-full aligncenter\" src=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360.png\" alt=\"\" width=\"960\" height=\"323\" srcset=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360.png 960w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360-336x113.png 336w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360-771x259.png 771w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Lilly-Autotagging-Case-Study-Visual-e1740169137360-768x258.png 768w\" sizes=\"auto, (max-width: 960px) 100vw, 960px\" \/><\/a>With the help of the client\u2019s technical infrastructure team, EK developed a new corpus analysis and ELN autotagging pipeline that leveraged the taxonomy management system\u2019s built-in document analyzer and integrated the results with their data warehouse and search schema. Through three rounds of testing, EK iteratively improved the extraction of metadata from ELNs using the concepts in the semantic model to provide additional metadata on over 30,000 ELNs to be leveraged within the search platform. EK wireframed 6 new User Interface (UI) features and enhancements for the search platform designed to leverage the additional metadata provided by the autotagging pipeline, including search-as-you-type functionality and improved search filters, and socialized them with the client\u2019s UI\/ User Experience (UX) team. Finally, EK supported the client with strategic guidance for leveraging their internal LLM service to create accurate regulatory reports and AI summaries of ELNs within the search platform.<\/span>\r\n<ul><\/ul>\r\n<\/div>\r\n<\/div>\r\n<!-- \/wp:post-content -->\r\n\r\n<!-- wp:media-text {\"align\":\"wide\",\"mediaId\":11019,\"mediaType\":\"image\",\"mediaWidth\":15,\"verticalAlignment\":\"top\"} -->\r\n<div class=\"wp-block-media-text alignwide is-stacked-on-mobile is-vertically-aligned-top\" style=\"grid-template-columns: 15% auto;\">\r\n<figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"771\" height=\"771\" class=\"wp-image-11019 size-full\" src=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/EK-Difference-01.png\" alt=\"\" srcset=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/EK-Difference-01.png 771w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/EK-Difference-01-336x336.png 336w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/EK-Difference-01-140x140.png 140w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/EK-Difference-01-768x768.png 768w\" sizes=\"auto, (max-width: 771px) 100vw, 771px\" \/><\/figure>\r\n<div class=\"wp-block-media-text__content\"><!-- wp:heading -->\r\n<h2 class=\"wp-block-heading\">The EK Difference<\/h2>\r\n<!-- \/wp:heading -->\r\n\r\n<!-- wp:paragraph --><span style=\"font-weight: 400;\">EK leveraged its understanding of the capabilities and features of enterprise search platforms, and taxonomy management systems\u2019 functionality, to advise the organization on industry standards and best practices for managing its taxonomy and optimizing search with semantics. Furthermore, EK\u2019s experience working with other pharmaceutical institutions and large organizations in the development of semantic models benefited the client by ensuring their semantic models were comprehensively and specifically tailored to meet their needs for the development of their semantic search platform and generative AI use cases. Throughout the engagement, EK incorporated an Agile project approach that focused on iterative development and regular insight gathering from client stakeholders, to quickly prototype enhancements to the autotagging pipeline, semantic models and the search platform that the client could present to internal stakeholders to gain buy-in for future expansion.\u00a0<\/span> <!-- \/wp:paragraph --><\/div>\r\n<\/div>\r\n<!-- \/wp:media-text -->\r\n\r\n<!-- wp:media-text {\"align\":\"wide\",\"mediaId\":11020,\"mediaType\":\"image\",\"mediaWidth\":15,\"verticalAlignment\":\"top\",\"className\":\"is-style-default\"} -->\r\n<div class=\"wp-block-media-text alignwide is-stacked-on-mobile is-vertically-aligned-top is-style-default\" style=\"grid-template-columns: 15% auto;\">\r\n<figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"771\" height=\"771\" class=\"wp-image-11020 size-full\" src=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Results-01.png\" alt=\"\" srcset=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Results-01.png 771w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Results-01-336x336.png 336w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Results-01-140x140.png 140w, https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Results-01-768x768.png 768w\" sizes=\"auto, (max-width: 771px) 100vw, 771px\" \/><\/figure>\r\n<div class=\"wp-block-media-text__content\"><!-- wp:heading -->\r\n<h2 class=\"wp-block-heading\">The Results<\/h2>\r\n<!-- \/wp:heading -->\r\n\r\n<!-- wp:paragraph --><span style=\"font-weight: 400;\">EK&#8217;s expertise in knowledge extraction, semantic modeling and implementation, along with a user-focused strategy that ensured that improvements to the search platform were grounded in stakeholder needs, enabled EK to effectively provide the client with a major update to their search experience. As a result of the engagement, the client\u2019s newly established autotagging pipeline is enhancing tens of thousands of critical research documents with much-needed additional metadata, enabling dynamic context-aware searches and providing users of the search platform with insight at a glance into what information an ELN contains. The semantic models powering the upgraded search experience allow users to look for information using natural, familiar language by capturing synonyms and alternative spellings of common search terms, ensuring that users can find what they are looking for without having to do multiple searches. The planned enhancements to the search platform will save scientists at the company hours every week from searching for information and judging if specific ELNs are useful for their purposes or not, reducing reliance on individual employee knowledge and the need for the regulatory intelligence team to rediscover institutional knowledge.<\/span> <span style=\"font-weight: 400;\">Furthermore, the company is equipped to move forward towards leveraging the combined power of semantic models and AI to improve the speed and efficiency of document understanding and use. By utilizing improved document metadata provided by the auto-tagging pipeline in conjunction with their internal LLM service, they will be able to generate factual document summaries in the search platform and automate the creation of regulatory reports in a secure, verifiable, and hallucination-free manner.\u00a0<\/span><\/div>\r\n<div>\u00a0<\/div>\r\n<div class=\"wp-block-media-text__content\"><!-- \/wp:paragraph -->\r\n\r\n<!-- wp:paragraph \/-->\r\n\r\n<!-- wp:spacer {\"height\":\"24px\"} --><br \/><!-- \/wp:spacer -->\r\n\r\n<!-- wp:spacer {\"height\":\"48px\"} --><\/div>\r\n<\/div>\r\n<p>&nbsp;<\/p>\r\n<div class=\"wp-block-stackable-call-to-action alignfull stk-block-call-to-action stk-block stk-771a887 stk-block-background is-style-default\" data-v=\"2\" data-block-id=\"771a887\">\r\n<div class=\"stk-block-call-to-action__content stk-content-align stk-771a887-column alignfull stk-container stk-771a887-container stk-hover-parent\">\r\n<div class=\"has-text-align-center stk-block-content stk-inner-blocks stk-771a887-inner-blocks\"><!-- \/wp:spacer -->\r\n\r\n<!-- wp:stackable\/button-group {\"uniqueId\":\"820aa2f\"} -->\r\n<div class=\"wp-block-stackable-button-group stk-block-button-group stk-block stk-820aa2f\" data-block-id=\"820aa2f\">\r\n<div class=\"stk-row stk-inner-blocks stk-block-content stk-button-group\"><!-- wp:stackable\/button {\"uniqueId\":\"d4dce62\",\"buttonPadding\":{\"top\":6,\"right\":40,\"bottom\":6,\"left\":40},\"buttonBackgroundColor\":\"#E7E0F3\",\"buttonBorderRadius\":50,\"textColor1\":\"#000000\"} -->\r\n<div data-block-id=\"d4dce62\"><a href=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2025\/02\/Enabling-Semantic-Search.pdf\" target=\"_blank\" rel=\"noopener\">Download Flyer<\/a><\/div>\r\n<div data-block-id=\"d4dce62\">\u00a0<\/div>\r\n<div class=\"wp-block-stackable-button stk-block-button stk-block stk-d4dce62\" data-block-id=\"d4dce62\"><a class=\"stk-link stk-button stk--hover-effect-darken\" href=\"https:\/\/enterprise-knowledge.com\/contact-us\/\" target=\"_blank\" rel=\"noreferrer noopener\"><span class=\"has-text-color stk-button__inner-text\">Get in Touch<\/span><\/a><\/div>\r\n<!-- \/wp:stackable\/button --><\/div>\r\n<\/div>\r\n<!-- \/wp:stackable\/button-group --><\/div>\r\n<\/div>\r\n<\/div>\r\n<!-- \/wp:media-text -->","protected":false},"excerpt":{"rendered":"<p>The Challenge A major pharmaceutical research and development company faced difficulty creating regulatory reports and files based on years of drug experimentation data. Their regulatory intelligence teams and drug development chemists spent dozens of hours searching through hundreds of thousands &hellip; <a href=\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/\"  class=\"with-arrow\">Continue reading<\/a><\/p>\n","protected":false},"author":17,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"inline_featured_image":false,"_uag_custom_page_level_css":"","footnotes":""},"categories":[718,183,184],"tags":[304,328,1297,1372,202],"article-type":[721],"solution":[1089,1275,1111],"ppma_author":[1391],"class_list":["post-23177","post","type-post","status-publish","format-standard","hentry","category-enterprise-search","category-strategy-design","category-taxonomy-ontology-design","tag-auto-tagging","tag-fixing-search","tag-generative-ai","tag-pharmaceutical","tag-taxonomy","article-type-case-study","solution-km-transformation","solution-semantic-layer","solution-taxonomy-ontology"],"acf":[],"featured_image_urls_v2":{"full":"","thumbnail":"","medium":"","medium_large":"","large":"","1536x1536":"","2048x2048":"","slideshow":"","slideshow-2x":"","banner":"","home-large":"","home-medium":"","home-small":"","gform-image-choice-sm":"","gform-image-choice-md":"","gform-image-choice-lg":""},"post_excerpt_stackable_v2":"<p>The Challenge A major pharmaceutical research and development company faced difficulty creating regulatory reports and files based on years of drug experimentation data. Their regulatory intelligence teams and drug development chemists spent dozens of hours searching through hundreds of thousands of documents to find past experiments and their results in order to fill out regulatory compliance documentation. The company\u2019s internal search platform enabled users to look for documents, but required exact matches on specific keywords to surface relevant results, and lacked useful search filters. Additionally, due to the nature of chemistry and drug development, many documents were difficult to understand&hellip;<\/p>\n","category_list_v2":"<a href=\"https:\/\/enterprise-knowledge.com\/category\/enterprise-search\/\" rel=\"category tag\">Enterprise Search<\/a>, <a href=\"https:\/\/enterprise-knowledge.com\/category\/strategy-design\/\" rel=\"category tag\">Knowledge Management Strategy &amp; Design<\/a>, <a href=\"https:\/\/enterprise-knowledge.com\/category\/taxonomy-ontology-design\/\" rel=\"category tag\">Taxonomy &amp; Ontology Design<\/a>","author_info_v2":{"name":"EK Team","url":"https:\/\/enterprise-knowledge.com\/author\/enterprise-knowledge\/"},"comments_num_v2":"0 comments","yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Extracting Knowledge From Documents: Enabling Semantic Search<\/title>\n<meta name=\"description\" content=\"EK worked with a major pharmaceutical research and development company to update their search experience using ELN metadata.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Extracting Knowledge From Documents: Enabling Semantic Search\" \/>\n<meta property=\"og:description\" content=\"EK worked with a major pharmaceutical research and development company to update their search experience using ELN metadata.\" \/>\n<meta property=\"og:url\" content=\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/\" \/>\n<meta property=\"og:site_name\" content=\"Enterprise Knowledge\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/Enterprise-Knowledge-359618484181651\/\" \/>\n<meta property=\"article:published_time\" content=\"2025-03-03T18:00:37+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2025-11-17T22:16:03+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01.png\" \/>\n\t<meta property=\"og:image:width\" content=\"771\" \/>\n\t<meta property=\"og:image:height\" content=\"771\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/png\" \/>\n<meta name=\"author\" content=\"EK Team\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:creator\" content=\"@EKConsulting\" \/>\n<meta name=\"twitter:site\" content=\"@EKConsulting\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"EK Team\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"5 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/\"},\"author\":{\"name\":\"EK Team\",\"@id\":\"https:\/\/enterprise-knowledge.com\/#\/schema\/person\/fe4c950023b0a2d4ea9057f16c70a16c\"},\"headline\":\"Extracting Knowledge from Documents: Enabling Semantic Search for Pharmaceutical Research and Development\",\"datePublished\":\"2025-03-03T18:00:37+00:00\",\"dateModified\":\"2025-11-17T22:16:03+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/\"},\"wordCount\":781,\"publisher\":{\"@id\":\"https:\/\/enterprise-knowledge.com\/#organization\"},\"image\":{\"@id\":\"https:\/\/enterprise-knowledge.com\/extracting-knowledge-from-documents-enabling-semantic-search\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/enterprise-knowledge.com\/wp-content\/uploads\/2020\/04\/Challenge-01.png\",\"keywords\":[\"auto-tagging\",\"fixing search\",\"generative AI\",\"pharmaceutical\",\"Taxonomy\"],\"articleSection\":[\"Enterprise Search\",\"Knowledge Management Strategy &amp; 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